Protein Profiling/Mass Spectrometry Publications
Protein Profiling/Mass Spectrometry Publications

  1. Cho CY, Koo SH, Wang Y, Callaway S, Hedrick S, Mak PA, Orth AP, Peters EC, Saez E, Montminy M, et al. Identification of the tyrosine phosphatase PTP-MEG2 as an antagonist of hepatic insulin signaling. Cell Metab 2006;3(5):367-78.
  2. Willingham AT, Orth AP, Batalov S, Peters EC, Wen BG, Aza-Blanc P, Hogenesch JB, Schultz PG. A strategy for probing the function of noncoding RNAs finds a repressor of NFAT. Science 2005;309(5740):1570-3.
  3. Peters EC. A polymeric solution for enriching the phosphoproteome. Nature methods 2005;2(8):579-80.
  4. Ficarro SB, Salomon AR, Brill LM, Mason DE, Stettler-Gill M, Brock A, Peters EC. Automated immobilized metal affinity chromatography/nano-liquid chromatography/electrospray ionization mass spectrometry platform for profiling protein phosphorylation sites. Rapid Commun Mass Spectrom 2005;19(1):57-71.
  5. Brittain SM, Ficarro SB, Brock A, Peters EC. Enrichment and analysis of peptide subsets using fluorous affinity tags and mass spectrometry. Nat Biotechnol 2005;23(4):463-8.
  6. Xie J, Wang L, Wu N, Brock A, Spraggon G, Schultz PG. The site-specific incorporation of p-iodo-L-phenylalanine into proteins for structure determination. Nat Biotechnol 2004;22(10):1297-301.
  7. Tai HC, Khidekel N, Ficarro SB, Peters EC, Hsieh-Wilson LC. Parallel identification of O-GlcNAc-modified proteins from cell lysates. J Am Chem Soc 2004;126(34):10500-1.
  8. Peters EC, Brock A, Ficarro SB. Exploring the phosphoproteome with mass spectrometry. Mini-Rev Med Chem 2004;4(3):313-24.
  9. Mason DE, Ek J, Peters EC, Harris JL. Substrate profiling of deubiquitin hydrolases with a positional scanning library and mass spectrometry. Biochemistry 2004;43(21):6535-44.
  10. Khidekel N, Ficarro SB, Peters EC, Hsieh-Wilson LC. Exploring the O-GlcNAc proteome: direct identification of O-GlcNAc-modified proteins from the brain. Proc Natl Acad Sci U S A 2004;101(36):13132-7.
  11. Horn DM, Peters EC, Klock H, Meyers A, Brock A. Improved protein identification using automated high mass measurement accuracy MALDI FT-ICR MS peptide mass fingerprinting. Int J Mass Spectrom 2004;238(2):189-196.
  12. Harris J, Mason DE, Li J, Burdick KW, Backes BJ, Chen T, Shipway A, Van Heeke G, Gough L, Ghaemmaghami A, et tal. Activity profile of dust mite allergen extract using substrate libraries and functional proteomic microarrays. Chem Biol 2004;11(10):1361-72.
  13. Brill LM, Salomon AR, Ficarro SB, Mukherji M, Stettler-Gill M, Peters EC. Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. Anal Chem 2004;76(10):2763-72.
  14. Zhang Z, Smith BA, Wang L, Brock A, Cho C, Schultz PG. A new strategy for the site-specific modification of proteins in vivo. Biochemistry 2003;42(22):6735-46.
  15. Wang L, Zhang Z, Brock A, Schultz PG. Addition of the keto functional group to the genetic code of Escherichia coli. Proc Natl Acad Sci U S A 2003;100(1):56-61.
  16. Salomon AR, Ficarro SB, Brill LM, Brinker A, Phung QT, Ericson C, Sauer K, Brock A, Horn DM, Schultz PG, et al. Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry. Proc Natl Acad Sci U S A 2003;100(2):443-8.
  17. Liu H, Wang L, Brock A, Wong CH, Schultz PG. A method for the generation of glycoprotein mimetics. J Am Chem Soc 2003;125(7):1702-3.
  18. Ericson C, Phung QT, Horn DM, Peters EC, Fitchett JR, Ficarro SB, Salomon AR, Brill LM, Brock A. An automated noncontact deposition interface for liquid chromatography matrix-assisted laser desorption/ionization mass spectrometry. Anal Chem 2003;75(10):2309-15.
  19. Ding S, Wu TY, Brinker A, Peters EC, Hur W, Gray NS, Schultz PG. Synthetic small molecules that control stem cell fate. Proc Natl Acad Sci U S A 2003;100(13):7632-7.
  20. Chanda SK, White S, Orth AP, Reisdorph R, Miraglia L, Thomas RS, DeJesus P, Mason DE, Huang Q, Vega R, et al. Genome-scale functional profiling of the mammalian AP-1 signaling pathway. Proc Natl Acad Sci U S A 2003;100(21):12153-8.
  21. Brock A, Horn DM, Peters EC, Shaw CM, Ericson C, Phung QT, Salomon AR. An automated matrix-assisted laser desorption/ionization quadrupole Fourier transform ion cyclotron resonance mass spectrometer for "bottom-up" proteomics. Anal Chem 2003;75(14):3419-28.
  22. Zhang Z, Wang L, Brock A, Schultz PG. The selective incorporation of alkenes into proteins in Escherichia coli. Angew Chem, Int Ed Engl 2002;41(15):2840-2.
  23. Winssinger N, Ficarro S, Schultz PG, Harris JL. Profiling protein function with small molecule microarrays. Proc Natl Acad Sci U S A 2002;99(17):11139-44.
  24. Peters EC, Brock A, Horn DM, Phung QT, Ericson C, Salomon AR, Ficarro SB, Brill LM. An automated LC-MALDI FT-ICR MS platform for high-throughput proteomics. Lc Gc Europe 2002;15(7):423-428.
  25. Wang L, Brock A, Herberich B, Schultz PG. Expanding the genetic code of Escherichia coli. Science 2001;292(5516):498-500.
  26. Peters EC, Horn DM, Tully DC, Brock A. A novel multifunctional labeling reagent for enhanced protein characterization with mass spectrometry. Rapid Commun Mass Spectrom 2001;15(24):2387-92.